幻灯片10Simulation(modeling/computation/theory)andexperimentCalaskarching for wy keys.Because thelight here is somuchbetter!理论与现实的差距上一页Warshel的例子是计算模拟的人们内部的纷争,实验对做理论计算的人的看法又是什么?Thedrunken man searchingfor hiskeys (solution):Aawkward situation ofcomputation/simulation/theory people in thereal world (experimentalproblems);Agap between reality (bar)andtheory (street lamp)
幻灯片 10 Simulation (modeling/computation/theory) and experiment 10 Because the light here is so much better! 理论与现实的差距 上一页Warshel的例子是计算模拟的人们内部的纷争,实验对做理论计算的人的 看法又是什么? • The drunken man searching for his keys (solution): A awkward situation of computation/simulation/theory people in the real world (experimental problems); • A gap between reality (bar) and theory (street lamp)
幻灯片11ModelModel:An encapsulated"black-box" can predict properties.Given necessary input, itautomatically provides relevantoutput;Build a model:·SimplificationisthekeyUseamodel:·Information lost inevitable;?Attitude: principles (the more the- Must find descriptors;better)andlimitations(mustknow);·Mechanismforautomation:?Levels ofmodeling:a)take-then-use,input->output (qualitativeb)minor adjustments, c) majorand quantitative);modification,d)build new models.Understandyour model&system:·Abletopredict:directionofmisuse&abusing modelssystems'evolution关于模型1、模型的特征是Encapsulation【封装】或者说self-contained【完备的】,atermborrowedfromcomputerscience(object-orientedprogramming)Amodel isclosetowhatanObjectmeansinprogramming:encapsulated,inheritable, overloading/overriding, with private/public variable/methods....2、建立模型【简化是关键!】【代价是信息损失】【描述因子是关键抓手】【建立输入输出转换机制】3、使用模型I、Take-&-use:computation/calculation=analysistool(XRD,TEM...);【与使用分析测试仪器一样】adjustment/overhaul:modeling/simulation;【进入建模】buildnewones:modeling/theory【进入理论化学的范畴】Il、misuse&abusingmodels:e.g.B3LYP in excited states forconjugated systems orchargeseparatedsystems(zwitterions)。【流行的不一定是好(对)的】
幻灯片 11 Model 11 Model:An encapsulated ”blackbox” can predict properties. Given necessary input, it automatically provides relevant output; Build a model: • Simplification is the key; • Information lost inevitable; • Must find descriptors; • Mechanism for automation: input-> output (qualitative and quantitative); • Able to predict: direction of systems’ evolution • Attitude: principles (the more the better) and limitations (must know); • Levels of modeling: a) take-then-use, b)minor adjustments, c) major modification, d) build new models: • Understand your model & system: misuse & abusing models Use a model: 关于模型 1、模型的特征是Encapsulation【封装】或者说self-contained【完备的】, a term borrowed from computer science (object-oriented programming). A model is close to what an Object means in programming: encapsulated, inheritable, overloading/overriding, with private/public variable/methods. 2、建立模型 【简化是关键!】 【代价是信息损失】 【描述因子是关键抓手】 【建立输入输出转换机制】 3、使用模型 I、Take-&-use: computation/calculation = analysis tool (XRD, TEM.); 【与使用分 析测试仪器一样】 adjustment/overhaul: modeling/simulation; 【进入建模】 build new ones: modeling/theory【进入理论化学的范畴】 II、misuse & abusing models: e.g. B3LYP in excited states for conjugated systems or charge separated systems (zwitterions)。【流行的不一定是好(对)的】
幻灯片12Models?Modeling (evaluation) is everywhere;·Assess a model:What You KnowvsHow much youknowabout itgood/correct vs.cost-Whnt Youperformanceratio;Doh.? Limit of a model;ALIKALotoeacbrotModels(algorithms)arejustmorequantitativeextrapolationand interpolation of intuitions模拟1、模型即能够将输入信息转变为预测性的输出信息的黑匣子2、模拟无处不在!起床看太阳,判断下雨的几率。输入信息(descriptor)为太阳的亮度,输出下雨的几率。过马路、食堂打饭排队.3、模型的好坏八电子规则【各位已经能够做电子结构的计算了!!!】、共振理论、分子轨道理论、自然键轨道理论:VSEPR【价电子互斥理论】、晶体场、配位场理论;4、模型的局限性滥用模型abusethemodel(Oops!Youovershotit)5、模型(算法)的本质对直觉和已有知识的定量化的【外推和内插】
幻灯片 12 Models 12 • Modeling (evaluation) is everywhere; • Assess a model: good/correct vs. costperformance ratio; • Limit of a model; • Models (algorithms) are just more quantitative extrapolation and interpolation of intuitions 模拟 1、模型即能够将输入信息转变为预测性的输出信息的黑匣子 2、模拟无处不在! 起床看太阳,判断下雨的几率。输入信息(descriptor)为太阳的亮度,输出下 雨的几率。 过马路、食堂打饭排队.; 3、模型的好坏 八电子规则【各位已经能够做电子结构的计算了!!!】、共振理论、分子轨道理 论、自然键轨道理论;VSEPR【价电子互斥理论】、晶体场、配位场理论; 4、模型的局限性 滥用模型 abuse the model (Oops! You overshot it) 5、模型(算法)的本质 对直觉和已有知识的定量化的【外推和内插】
幻灯片13TopicsnotcoveredWecanmodel everything!6fo电子结构在多尺度模拟中的位置1、跨(多)尺度模拟图;【一切皆可模拟!】横轴尺度纵轴时间2、我们观测或者计算什么?实验上可以观察连续的变化或者关键的稳态:我们讨论的量子化学计算模拟关心电子结构和演化(伪),本质是模拟/获取snapshots;3、化学键实时的变化需要电子动力学:在左下角Lowerleftcorner:Quantumelectrondynamics
幻灯片 13 Topics not covered 13 We can model everything! 电子结构在多尺度模拟中的位置 1、跨(多)尺度模拟图;【一切皆可模拟!】 横轴 尺度 纵轴 时间 2、我们观测或者计算什么? 实验上可以观察连续的变化或者关键的稳态; 我们讨论的量子化学计算模拟关心电子结构和演化(伪),本质是模拟/获取 snapshots; 3、化学键实时的变化需要电子动力学;在左下角Lower left corner: Quantum electron dynamics
幻灯片14Simulationrelatedconcepts·Theoreticalchemistry.Quantummechanics/classicalmechanicsbasedmodelsforchemicalsystems.Computationalchemistry.Program(algorithm)+chemicalsystems.Quantumchemistry.Chemicalsystemsexplainedbyquantummechanics(throughcomputation).Electronicstructurecalculation.Computationalchemistryfocusedonchemicalbonds (static,formation/cleavage)这些概念没有严格的定义,使用起来主要是看习惯和偏好。【板书:理论化学,计算化学,量子化学,电子结构计算】【跟量子计算不同】Quantumcomputingiscomputingusingquantum-mechanicalphenomena,suchassuperpositionandentanglement.Quantumcomputation uses quantum bits or qubits, n qubits can superpose into 2n states,equal(?)to2^nbit ofmemory.measurement collapses the states intoone
幻灯片 14 1 4 Simulation related concepts • Theoretical chemistry • Quantum mechanics/classical mechanics based models for chemical systems • Computational chemistry • Program (algorithm) + chemical systems • Quantum chemistry • Chemical systems explained by quantum mechanics (through computation) • Electronic structure calculation • Computational chemistry focused on chemical bonds (static, formation/cleavage) 这些概念没有严格的定义,使用起来主要是看习惯和偏好。 【板书:理论化学,计算化学,量子化学,电子结构计算】 【跟量子计算不同】Quantum computing is computing using quantummechanical phenomena, such as superposition and entanglement. Quantum computation uses quantum bits or qubits, n qubits can superpose into 2^n states, equal(?) to 2^n bit of memory. measurement collapses the states into one